Research group

BiOmics

Bar coded DNA sample

Technological advances have allowed scientists to gather large amounts of data about a vast array of species, organisms and single cells. Our researchers are using mathematical modelling, machine learning and other algorithms to extract information and patterns from large data sets to further our understanding of disease.

About

Contemporary scientific research benefits from rapid technological developments that enable the characterisation and quantification of biological molecules at unprecedented scale. Scientists can generate vast data that provide insight into the complex interplay of molecules within organisms. Interrogation and interpretation of these data inform the structure, function and interaction of molecules over time. 

We use ‘Omic technologies comprehensively to evaluate DNA (genomics), RNA (transcriptomics) and proteins (proteomics). We study small molecules using metabolomics. Microorganisms are investigated in a targeted manner using microbiomics or more broadly to characterise mixed samples using metagenomics.

At the University of Southampton, we generate vast datasets using these approaches across a wide range of environments and species. We work closely with NHS partners to use these capabilities to understand human disease and inform its clinical management. We bring together medical and biological scientists with mathematicians, computer and data scientists to develop and apply methods that exploit these data to their fullest potential.

From analysing patient genomes, to carrying out metagenomic analysis of water samples to using mass spectrometry metabolic profiling techniques, our scientists are studying the unique processes that take place within cells that can lead to disease or poor health outcomes in humans and help track changes in the environment.   

We are using data to answer clinical questions in areas such as cancer, autoimmune and respiratory diseases with the help of clinical colleagues we are translating our findings into novel techniques for clinicians to treat their patients, make predictions about prognosis and drug responsiveness.

Our researchers collaborate with partners at:

People, projects and publications

People

Dr Katy Sivyer CPsychol, DPhil, MSc, BA

Lecturer

Research interests

  • Understanding how psychological treatments and behaviour change interventions work

Accepting applications from PhD students

Connect with Katy

Professor Keith Godfrey

Associate Dean Enterprise
Connect with Keith

Dr Kelvin Peh

Assoc Professor of Conservation Science

Research interests

  • Kelvin Peh’s interests range from forest ecology to urban wildlife in respect of diversity and distribution. He is interested in all areas of wildlife-human conflicts and wildlife ecology in human-dominated landscapes, and in the application of his research results to the conservation/management of biological resources.
  • Tropical Forest Ecology – Kelvin’s work on monodominance in tropical tree-dominated systems - has helped rekindle scientific interest in this fascinating, yet relatively unexplored phenomenon in tropical forests. He has completed editing – as a principal editor – a “Routledge Handbook of Forest Ecology Second Edition” that will be published by Routledge under its “Earthscan” imprint on 7 October 2024 (available at www.routledge.com/9781032348384).
  • Ecosystem Services – Kelvin is best known for his leading role in the development of TESSA (Toolkit for Ecosystem Service Site-based Assessment). TESSA v3.0, published on 31 Oct 2022, is now available at https://www.birdlife.org/tessa-tools/. For the impacts of TESSA, see: https://bit.ly/4ccpken. He continues working on this ecosystem service assessment project to develop and test novel tools for rapidly assessing the net impact of site-based conservation on the provision of ecosystem services. This project runs in collaboration with the University of Cambridge, the Royal Society for the Protection of Birds, BirdLife International, Tropical Biology Association, Anglia Ruskin University and UNEP-World Conservation Monitoring Centre. Currently, he is leading the ecosystem service task team of the Asian Development Bank’s Regional Flyway Initiative.

Accepting applications from PhD students

Connect with Kelvin

Dr Kif Liakath-Ali MSc, MPhil, PhD.

Lecturer in Advanced Cell Biology

Accepting applications from PhD students

Connect with Kif

Dr Kirsten Poore

Principal Teaching Fellow
Connect with Kirsten

Professor Koushik Maharatna PhD

Prof Signal Processing System Design
Connect with Koushik

Dr Lei Li

Lecturer

Research interests

  • Cardiac Digital Twins
  • Medical Image Analysis 
  • Multi-Modal AI

Accepting applications from PhD students

Connect with Lei

Dr Leisle Ezekiel PhD

Lecturer

Accepting applications from PhD students

Connect with Leisle

Dr Lex Kraaijeveld

Principal Teaching Fellow
Connect with Lex

Dr Libo Li

Lecturer in Business Analytics

Research interests

  • Time-to-event analysis
  • Text analytics
  • Network analytics 

Accepting applications from PhD students

Connect with Libo
We are at a very exciting time in Life Science Research. The potential for novel discovery using ‘omics technologies combined with the computer science methodologies is immense.
Professor of Genomics

Related research institutes, centres and groups

Related research institutes, centres and groups

Contact us

Contact us

Contact the Institute for Life Sciences team by emailing: